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2009
- Shijie Zhang, Jiong Yang, and Shirong Li. RING:
an integrated method for frequent representative subgraph mining. To
appear in Proceedings of ICDM
Conference, 2009.
- Shijie Zhang, Shirong Li, and Jiong Yang. Gaddi: distance index based subgraph matching in
biological networks. Proceedings
of EDBT Conference, pp. 192-203, 2009.
- Shijie Zhang, Wei Su, and Jiong Yang. ARCS-Motif: discovering correlated
motifs from unaligned biological sequences. Oxford Bioinformatics Journal, vol. 25 no. 2, 2009.
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2008
- Meng Hu, Jiong Yang, and Wei Su. Permu-pattern:
discovery of mutable permutation patterns with proximity constraint.
KDD, 2008.
- Ray-Yaung Chang, Andy
Podgurski, and Jiong Yang. Discovering neglected
conditions in software by mining dependence graphs. IEEE Transactions
on Software Engineering, vol. 34, no. 5, pp. 579-596, 2008.
- Shijie Zhang and Jiong
Yang, RAM: randomized approximate graph
mining. SSDBM, 2008.
- Meng Hu, Kwangmin
Choi, Wei Su, Sun Kim, and Jiong Yang, A gene
pattern mining algorithm using mutable sets
for prokaryotes, BMC
Bioinformatics Journal, 9:124, 2008.
- Pankaj Chopra, Jaewoo Kang, Jiong
Yang, Hyung-Jun Cho, Heenam S. Kim, and Min-Goo Lee, Microarray data mining using landmark gene-guided
clustering, BMC Bioinformatics Journal, 9:92, 2008.
2007
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- Gurkan Bebek
and Jiong Yang, PathFinder: mining signal
transduction pathway segments from protein-protein interaction networks,
BMC Bioinformatics Journal 8:335, 2007.
- Ray-Yaung
Chang, Andy Podgurski, and Jiong Yang. Finding what¡¯s not there: a new approach to revealing neglected
conditions in software, ISSTA, 163-173, 2007. (Winner of the best paper award)
-
Shijie Zhang, Meng Hu, and Jiong Yang, TreePi: A
Novel
Graph Indexing Method, Proceedings of IEEE International Conference on
Data Engineering (ICDE), 966-975
2007.
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Shijie Zhang, Jiong Yang, and VenuMadhav Cheedella, Monkey: Approximate Graph Mining Based on Spanning
Trees, Proceedings of IEEE International Conference on Data Engineering
(ICDE), 1247-1249, 2007.
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2006
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Jiong Yang and Meng Hu, TrajPattern: Mining
Sequential Patterns from Imprecise Trajectories of Mobile Objects, to
appear in EDBT 2006.
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Bin Song, Jeong-Hyeon Choi, Guangyu Chen, Guangyu Chen, Jacek Szymanski,
Guo-Qiang Zhang, Anthony K.H. Tung, Jaewoo Kang, Sun Kim, and Jiong Yang ARCS: An Aggregated Related Column Scoring Scheme
for Aligned Sequences, Bioinformatics, 22(19): 2326-2332 2006.
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Sun Kim, JeoungHyeon Choi, Amit Saple, and Jiong Yang, A Hybrid Gene Team Model and Its Application to
Genome Analysis, Journal
of Bioinformatics and Computational Biology Imperial College
Press.
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- Xiaoxin, Jiawei
Han, Jiong Yang, and Philip S. Yu. Efficient
Classification across Multiple Database Relations: A CrossMine Approach,
in IEEE Transactions
on Knowledge and Data Engineering (TKDE), 18(6): 770-783,
June 2006.
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Mustafa Kirac, Gultekin Ozsoyoglu, and Jiong Yang, Annotating
Proteins by Mining Protein Interaction Networks, to appear in
ISMB2006 and also in Oxford Bioinformatics 2006 22: e260-e270.
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2005
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Sun Kim, Jeong-Hyung Choi, and Jiong Yang, Gene
Teams with Relaxed Proximity Constraint, in IEEE
Computational Systems Bioinformatics (CSB): 44-55, Aug. 2005.
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Jaewoo Kang, Jiong Yang, Wanhong Xu, and Pankaj Chopra, Integrating Heterogeneous Microarray Data Sources
using Correlation Signatures. Proceedings
of the International Workshop on Data Integration in the Life Sciences
(DILS), Aug. 2005.
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- Lei
Liu, Jiong Yang, and Anthony K. H. Tung, Data
Mining Techniques for Microarray Datasets (Tutorial), in ICDE: 1149, Apr.
2005.
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Feng Pan, Wei Wang, Anthony K. H. Tung, and Jiong Yang, Finding Representative Set from Massive Data, in
proceedings
of the 5th IEEE International Conference on Data Mining (ICDM): 338-345, 2005.
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Xiaoxin Yin, Jiawei Han, and Jiong Yang, Searching
for Related Objects in Relational Databases, in Proc. 2005 Int. Conf. on
Scientific and Statistical Database Management (SSDBM):
227-236, Jun. 2005.
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Peter Bajcsy, Jiawei Han, Lei Liu, and Jiong Yang, Survey
of Biodata Analysis from a Data Mining Perspective in Data Mining in
Bioinformatics: 9-39, 2005
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Wei Wang, and Jiong Yang, Mining High-Dimensional
Data, in The Data Mining and Knowledge Discovery Handbook: 793-799, 2005.
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Hwanjo Yu, Jiong Yang, Jiawei, and Xiaolei Li, Making
SVMs Scalable to Large Data Sets using Hierarchical Cluster Indexing,
in Data Min. Knowl. Discov. 11(3): 295-321, 2005
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Meng Hu, and Jiong Yang, A System of User-Guided
Biological Literature Search Engine, in IEEE Data Eng. Bull. 28(4):
47-52, 2005.
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Wei Wang, and Jiong Yang: Guest Editors, Introduction:
Special Issue on Mining Biological Data, in IEEE Trans. Knowl. Data
Eng. 17(8): 1019-1020, 2005
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Jiong Yang, Haixun Wang, Wei Wang, and Philip S. Yu, An Improved Biclustering Method for Analyzing Gene
Expression Profiles, in International Journal on Artificial
Intelligence Tools 14(5): 771-790, 2005
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2004
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Jinze Liu, Jiong Yang, and Wei Wang, Biclustering
in Gene Expression Data by Tendency, in CSB 2004: 182-193
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Jinze Liu, Wei Wang, and Jiong Yang, Gene
Ontology Friendly Biclustering of Expression Profiles, in CSB 2004:
436-447
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Hui Fang, ChengXiang Zhai, Lei Liu, and Jiong Yang, Subspace Clustering for Microarray Data Analysis:
Multiple Criteria and Significance Assessment, in CSB 2004: 582-583
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Xiaoxin Yin, Jiawei Han, Jiong Yang, and Philip S. Yu, CrossMine: Efficient Classification Across Multiple
Database Relations, in Constraint-Based Mining and Inductive
Databases 2004: 172-195
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Xiaoxin Yin, Jiawei Han, Jiong Yang, and Philip S. Yu, CrossMine: Efficient Classification Across Multiple Database
Relations, in ICDE 2004: 399-411
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Jiong Yang, and Wei Wang, AGILE: A General
Approach to Detect Transitions in Evolving Data Streams, in ICDM
2004: 559-562
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Jun Huan, Wei Wang, Jan Prins, and Jiong Yang, SPIN:
mining maximal frequent subgraphs from graph databases, in KDD 2004:
581-586
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Yifan Li, Jiawei Han, and Jiong Yang, Clustering
moving objects, in Proceedings of 10th ACM International Conference
on Knowledge Discovery and Data Mining (KDD) in 2004
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Jinze Liu, Wei Wang, and Jiong Yang, A framework
for ontology-driven subspace clustering, in KDD 2004: 623-628
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Gao Cong, Anthony K. H. Tung, Xin Xu, Feng Pan, and Jiong Yang, FARMER: Finding Interesting Rule Groups in
Microarray Datasets, in SIGMOD Conference 2004: 143-154
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Yifan Li, Jiong Yang, and Jiawei Han, Continuous
K-Nearest Neighbor Search for Moving Objects, in SSDBM 2004: 123-126
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Jiong Yang, Wei Wang, and Philip S. Yu, BASS:
Approximate Search on Large String Databases, in SSDBM 2004: 181-
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Jiong Yang, Wei Wang, and Philip S. Yu, Mining
Surprising Periodic Patterns, in Data Min. Knowl. Discov. 9 (2):
189-216 (2004)
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Wei Wang, Jiong Yang, and Philip S. Yu, WAR:
Weighted Association Rules for Item Intensities, in Knowl. Inf. Syst.
6(2): 203-229 (2004)
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Jiong Yang, Wei Wang, and Philip S. Yu, Discovering
High-Order Periodic Patterns, in Knowl. Inf. Syst. 6(3): 243-268
(2004)
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2003
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Jiong Yang, Haixun Wang, Wei Wang, and Philip S. Yu, Enhanced Biclustering on Expression Data, in Bioinformatics
and Bioengineering Conference (BIBE) 2003: 321-327
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Hwanjo Yu, Jiong Yang, Wei Wang, and Jiawei Han, Discovering
Compact and Highly Discriminative Features or Feature Combinations of
Drug Activities Using Support Vector Machines, in CSB 2003: 220- 228
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Jiong Yang, Deliver Multimedia Streams with
Flexible QoS via a Multicast DAG, in ICDCS 2003: 126-137
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Jiong Yang, and Wei Wang, CLUSEQ: Efficient and
Effective Sequence Clustering, in ICDE 2003: 101-112
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Jiong Yang, Dynamic Clustering of Evolving
Streams with a Single Pass, in ICDE 2003: 695-697
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Hwanjo Yu, Jiong Yang, and Jiawei Han, Classifying
large data sets using SVMs with hierarchical clusters, in KDD 2003:
306-315
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Feng Pan, Gao Cong, Anthony K. H. Tung, Jiong Yang, and Mohammed Javeed
Zaki. Carpenter: finding closed patterns in long
biological datasets, in KDD 2003: 637-642
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Jiong Yang, Wei Wang, and Philip S. Yu. STAMP: On
Discovery of Statistically Important Pattern Repeats in Long Sequential
Data, in SDM 2003
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Jiong Yang, Wei Wang, and Philip S. Yu. Mining
Asynchronous Periodic Patterns in Time Series Data, in IEEE Trans.
Knowl. Data Eng. 15(3): 613-628 (2003)
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Zhiyuan Chen, Li Chen, Jian Pei, Yufei Tao, Haixun Wang, Wei Wang, Jiong
Yang, Jun Yang, and Donghui Zhang, Recent
Progress on Selected Topics in Database Research - A Report by Nine Young
Chinese Researchers Working in the United States, in J. Comput. Sci.
Technol. 18(5): 538-552 (2003)
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2002
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Jiong Yang, and Wei Wang, Towards Automatic Clustering
of Protein Sequences, in CSB 2002: 175-186
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Jiong Yang, Wei Wang, Yi Xia, and Philip S. Yu, Accelerating
Approximate Subsequence Search on Large Protein Sequence Databases,
in CSB 2002: 207-
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Wei Wang, and Jiong Yang, A Framework Towards
Efficient and Effective Sequence Clusterin, in ICDE 2002: 282
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Jiong Yang, Wei Wang, Haixun Wang, and Philip S. Yu, d-Clusters: Capturing Subspace Correlation in a
Large Data Set, in ICDE 2002: 517-528
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Jiong Yang, Wei Wang, and Philip S. Yu, InfoMiner+:
Mining Partial Periodic Patterns with Gap Penalties, in ICDM 2002:
725-728
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Yi Xia, Wei Wang, Jiong Yang, Philip S. Yu, and Richard R. Muntz, Efficient Filtering of Large DatasetA User-Centric
Paradigm, in SDM 2002
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Haixun Wang, Wei Wang, Jiong Yang, and Philip S. Yu, Clustering by pattern similarity in large data sets,
in SIGMOD Conference 2002: 394-405
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Jiong Yang, Wei Wang, Philip S. Yu, and Jiawei Han, Mining long sequential patterns in a noisy environment,
in SIGMOD Conference 2002: 406-417
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2001
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Wei Wang, Jiong Yang, and Richard R. Muntz, TAR:
Temporal Association Rules on Evolving Numerical Attributes, in ICDE
2001: 283-292
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Wei Wang, Jiong Yang, and Philip S. Yu, Meta-patterns:
Revealing Hidden Periodic Patterns, in ICDM 2001: 550-557
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Jiong Yang, Wei Wang, and Philip S. Yu, Infominer:
mining surprising periodic patterns, in KDD 2001: 395-400
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2000
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Jiong Yang, Wei Wang, Richard R. Muntz, and Silvia Nittel, Dynamic Adaptive File Management in a Local Area
Network, in ICDCS 2000: 368-375
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-
Wei Wang, Jiong Yang, and Philip S. Yu, Efficient
mining of weighted association rules (WAR), in KDD 2000: 270-274
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Jiong Yang, Wei Wang, and Philip S. Yu, Mining asynchronous
periodic patterns in time series data, in KDD 2000: 275-279
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Jiong Yang, Wei Wang, and Richard R. Muntz, Collaborative
Web caching based on proxy affinities, in SIGMETRICS 2000: 78-89
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Wei Wang, Jiong Yang, and Richard R. Muntz, An
Approach to Active Spatial Data Mining Based on Statistical Information,
in IEEE Trans. Knowl. Data Eng. 12(5): 715-728 (2000)
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Wei Wang, Jiong Yang, and Philip S. Yu, Mining
Patterns in Long Sequential Data with Noise, in SIGKDD Explorations
2(2): 28-33 (2000)
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Jiong Yang, Wei Wang, Silvia Nittel, Richard R. Muntz, and Vince Busam, Dynamo: design, implementation, and evaluation of
cooperative persistent object management in a local area network. Softw.,
in Pract. Exper. 30(4): 419-448 (2000)
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1999
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1998
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Wei Wang, Jiong Yang, and Richard R. Muntz, PK-tree:
A Spatial Index Structure for High Dimensional Point Data, in FODO 1998:
27-36
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Jiong Yang, Gil Neiger, and Eli Gafni, Structured
Derivations of Consensus Algorithms for Failure Detectors, in PODC
1998: 297-306
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Jiong Yang, Silvia Nittel, Wei Wang, and Richard R. Muntz, DynamO: Dynamic Objects with Persistent Storage,
in POS/PJW 1998: 199-214
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1997
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1996
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