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gs
A computer program is available to generate samples for association studies
based on HapMap data. The samples generated by the program can also be used in
testing algorithms for tag SNP selection and haplotype inference. Please send
your comments and suggestions to Jing Li (JINGLI AT EECS DOT CASE DOT EDU).
Dowdload the Program
The current version of gs is 1.3. If you use gs, please send me an email at
(JINGLI AT EECS DOT CASE DOT EDU), so that we can keep you informed of updates
and we could have an idea of the level of interest in the program.
Windows and Linux are
available now.
Citation
Jing Li and Yixuan Chen. Generating samples for association studies based on HapMap data.
Submitted. Supplementary materials: comparison of allele frequencies of simulated data and
real data from 10 HapMap-ENCODE regions and one region from ILLUMINA 550K chips by the extension
method and the block method.
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Updated 08/12/2007. |
